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Story #11558
open[FUSE] Integration test using real programs with complex write patterns.
Status:
New
Priority:
Normal
Assigned To:
-
Category:
-
Target version:
-
Start date:
Due date:
% Done:
0%
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Story points:
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Description
Test programs known to have trouble with writable fuse in the past:
- aws s3 downloader
- azure blobxfer
- aspera downloader
- bcl2fastq
'STAR', '--runMode', 'genomeGenerate', '--genomeDir', outdir.path, '--runThreadN',str(ncores), '--genomeFastaFiles', genome_fasta_file, '--sjdbOverhang', str(sjdbOverhang), '--sjdbGTFfile', gtf
Also file system benchmarking tools, e.g. fio
or iozone
https://github.com/axboe/fio
Benchmarking tools would have the added benefit of tracking performance and identifying regressions.
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