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Story #4566
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[Documentation] Introduce compute workflow / pipeline concepts in user guide
Status:
New
Priority:
Normal
Assigned To:
-
Category:
Documentation
Target version:
-
Start date:
Due date:
% Done:
0%
Estimated time:
Story points:
1.0
Description
The first page about running your own compute jobs (beyond using an existing template in Workbench) dives right into the deep end with bwa-mem and some UUIDs. http://doc.arvados.org/user/topics/running-pipeline-command-line.html
Before this page we need to- introduce the relevant concepts of pipeline templates, pipeline instances, components, and jobs
- mention the basic features of pipeline templates
- how data gets passed from one job to another in a pipeline with
output_of - how
script_parametersin a pipeline template relates to workbench UI, jobs, and task processes
- how data gets passed from one job to another in a pipeline with
- offer a couple of different scenarios, with a summary of the appropriate way to build and invoke pipelines in each case (with links to the examples on the other tutorial pages).
Updated by Tom Clegg about 10 years ago
- Description updated (diff)
- Category set to Documentation
Updated by Ward Vandewege over 3 years ago
- Target version deleted (
Arvados Future Sprints)
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