Arvados

Story

New

In Progress

Resolved

Sprint Impediments

19846

Use collection properties instead of links to tag docker images

13794,19860

Tom Clegg

impediments

-c-a

17004

Can set output_properties on output collection of a container request

Peter Amstutz

impediments

-c-a

18873

Add hooks to limit which paths of arvados repo non-curii employees can push to

Ward Vandewege

impediments

-c-a

19899 19899 Keep 53 Keep Stale cache wb2 in collection file list Resolved Resolved 3 19899 36 379 1
19625 19625 Sarah Zaranek Sarah Zaranek 326 Documentation 58 Documentation Text for playground onboarding page on arvados.org New New 1 19625 36 326 379 3
19676 19676 Peter Amstutz Peter Amstutz 47 Documentation 58 Documentation Turn data organization patterns deck into documentation page and/or blog post In Progress In Progress 2 19676 36 47 379 6		19679 19679 Review "data-mgtmt" branch in arvados-www Peter Amstutz 47 0 19676 2 36 -c-a 5
19940 19940 Workbench2 77 Workbench2 Long error or warning messages run over the containing box New New 1 19940 36 379 1
19885 19885 Stephen Smith Stephen Smith 2794 Workbench2 78 Workbench2 Collapse middle breadcrumbs with ellipse when window too narrow Arvados Workbench 2 47 New New 1 19885 47 2794 379 2
19931 19931 Workbench2 77 Workbench2 Frozen project error messages have poor visibility New New 1 19931 36 379 1
19935 19935 Documentation 58 Documentation Document arv-copy usage and format New New 1 19935 36 379 6
19830 19830 Brett Smith Brett Smith 79 Documentation 58 Documentation Write docstrings for arvados.util New New 1 0.5 0.5 0.5 19830 36 79 379 6 0.5
19825 19825 Brett Smith Brett Smith 79 Documentation 58 Documentation Write docstrings for arvados.events New New 1 0.5 0.5 0.5 19825 36 79 379 6 0.5
19821 19821 Brett Smith Brett Smith 79 Documentation 58 Documentation Write docstrings for arvados.collection New New 1 1.0 1.0 1.0 19821 36 79 379 6 1.0
19819 19819 Brett Smith Brett Smith 79 Documentation 58 Documentation Write docstrings for arvados.arvfile New New 1 1.0 1.0 1.0 19819 36 79 379 6 1.0
19818 19818 Brett Smith Brett Smith 79 Documentation 58 Documentation Write docstrings for arvados.api New New 1 0.5 0.5 0.5 19818 36 79 379 6 0.5
16583 16583 Peter Amstutz Peter Amstutz 47 Workbench2 77 Workbench2 Can programmatically distinguish between final outputs (results of top-level containers) and intermediate outputs. New New 1 16583 36 47 379 2	19163 19163 Write rake task Peter Amstutz 47 0 16583 1 36 -c-a 5 19173 19173 Review rake task branch Lucas Di Pentima 375 0 16583 1 36 -c-a 5		19118 19118 Review 16583-intermediate-collections on Workbench 2 Peter Amstutz 47 0 16583 3 36 -c-a 5
19369 19369 Workbench2 77 Workbench2 Update browser title to reflect current main panel view New New 1 19369 36 379 2
19637 19637 Workbench2 77 Workbench2 Recursive delete of workflow & associated intermediates New New 1 19637 36 379 2
18573 18573 Deployment 60 Deployment packer compute image builder script should take an explicit arvados package version to install instead of latest in selected package repository New New 1 18573 36 379 2
16369 16369 Workbench2 77 Workbench2 Should be possible to promote a workflow run via arvados-cwl-runner to a published workflow with one click New New 1 16369 36 379 2
9044 9044 Workbench2 77 Workbench2 [Crunch2] [Workbench] Browse and show tools using the GA4GH tool registry API New New 1 9044 36 379 6
19919 19919 Peter Amstutz Peter Amstutz 47 Workbench2 77 Workbench2 Copy workflow New New 1 19919 36 47 379 2
19860 19860 Tom Clegg Tom Clegg 3 Docker 68 Docker Support "pull image" container request New New 1 19860 36 3 379 2
19884 19884 Peter Amstutz Peter Amstutz 47 Documentation 58 Documentation keep_cache_disk runtime constraint is undocumented New New 1 19884 36 47 379 1
19908 19908 Stephen Smith Stephen Smith 2794 Workbench2 77 Workbench2 Advanced search requires limiting to project Resolved Resolved 3 19908 36 2794 379 1
16888 16888 Tom Clegg Tom Clegg 3 Crunch 52 Crunch Federate container token cannot access resources on other clusters In Progress In Progress 2 16888 36 3 379 1	19121 19121 Review Peter Amstutz 47 0 16888 1 36 -c-a 5 19242 19242 Engineering discussion about desired solution 0 16888 1 36 -c-a 5
19143 19143 Peter Amstutz Peter Amstutz 47 Workbench2 77 Workbench2 Display 'Workflow' records in the Project listing In Progress In Progress 2 19143 36 47 379 1	19162 19162 Add tests Peter Amstutz 47 0 19143 1 36 -c-a 5 19174 19174 Review tests branch Lucas Di Pentima 375 0 19143 1 36 -c-a 5		19151 19151 Review 19143-project-list-workflows Peter Amstutz 47 0 19143 3 36 -c-a 5
19634 19634 Stephen Smith Stephen Smith 2794 Workbench2 77 Workbench2 virtual machines admin failing when federated user home cluster is inaccessible New New 1 19634 36 2794 379 1
15250 15250 Jiayong Li Jiayong Li 303 CWL 79 CWL a-c-r set TTL on final output collection New New 1 15250 36 303 379 2	17459 17459 Review Peter Amstutz 47 0 15250 1 36 -c-a 5
19274 19274 Workbench2 77 Workbench2 Advanced search should have full set of selectable columns New New 1 19274 36 379 1
19891 19891 Workbench2 77 Workbench2 Move project dialog not sized correctly New New 1 19891 36 379 1
19048 19048 Workbench2 77 Workbench2 Copying a folder in collection file browser results in empty folder New New 1 19048 36 379 1
19181 19181 Workbench2 77 Workbench2 Workbench 2 uses replace_files API New New 1 19181 36 379 2
19871 19871 Workbench2 77 Workbench2 Rendering user names in project columns New New 1 19871 36 379 2
15768 15768 Workbench2 77 Workbench2 Support multi-select operations New New 1 15768 36 379 2
19482 19482 Peter Amstutz Peter Amstutz 47 Workbench2 77 Workbench2 Linkable view panel for registered workflows New New 1 19482 36 47 379 2
19887 19887 Workbench2 77 Workbench2 Include modified_by_user_uuid in project details New New 1 19887 36 379 2
18799 18799 Brett Smith Brett Smith 79 SDKs 54 SDKs Strategy to generate Python SDK docstrings based on API docs New New 1 18799 36 79 379 3	19724 19724 group review 0 18799 1 36 -c-a 5
18563 18563 Deployment 60 Deployment Simplify/streamline InternalURLs/ExternalURL situation New New 1 18563 36 379 2
19584 19584 Can we use better terms for a group_filter and projects Arvados Workbench 2 47 New New 1 19584 47 379 6
16055 16055 Sarah Zaranek Sarah Zaranek 326 Documentation 58 Documentation User guide update planning New New 1 16055 36 326 379 3
18968 18968 Workbench2 77 Workbench2 Should be able to pick directories within collections New New 1 18968 36 379 2	19188 19188 Review Peter Amstutz 47 0 18968 1 36 -c-a 5
18874 18874 Workbench2 77 Workbench2 Merge workbench2 history into main Arvados repo New New 1 18874 36 379 3
19859 19859 Review/update development process wiki page New New 1 19859 36 379 3
13418 13418 SDKs 54 SDKs Python SDK must have docstrings for all public interfaces New New 1 13418 36 379 3
19585 19585 Workbench2 78 Workbench2 When filtering objects in project listing when in "Share with Me" project - filtering to just see virtual projects doesn't seem to work Arvados Workbench 2 47 New New 1 19585 47 379 1
19873 19873 Documentation 58 Documentation Document ~/.config/arvados/settings.conf New New 1 19873 36 379 3
19302 19302 Workbench2 78 Workbench2 UX improvement: Left hand side tree state management. Arvados Workbench 2 47 Resolved Resolved 3 19302 47 379 1
15814 15814 Daniel Kutyła Daniel Kutyła 1510 Workbench2 77 Workbench2 Running a workflow from WB2 exposes secret inputs New New 1 15814 36 1510 379 1	18709 18709 Review Peter Amstutz 47 0 15814 1 36 -c-a 5
19713 19713 Workbench2 78 Workbench2 Misleading 'Too large file' error message on file upload Arvados Workbench 2 47 New New 1 19713 47 379 1
19480 19480 Peter Amstutz Peter Amstutz 47 Workbench2 78 Workbench2 remove "choose" flow from the registered workflow run page Arvados Workbench 2 47 New New 1 19480 47 47 379 1
19238 19238 Workbench2 77 Workbench2 Users deactivated externally show up as "Setup" instead of "Inactive", due to cached permissions? New New 1 19238 36 379 1
19080 19080 Workbench2 77 Workbench2 Offer to un-trash items, instead of "not found" dialog New New 1 19080 36 379 2
18860 18860 Workbench2 77 Workbench2 Display count of container attempts and make it easy to access past logs New New 1 18860 36 379 6
19365 19365 Documentation 58 Documentation Scoped token doc is out of date New New 1 19365 36 379 1
19633 19633 Workbench2 77 Workbench2 UX redesign ideas New New 1 19633 36 379 6
16071 16071 Workbench2 78 Workbench2 [Collection view] Provenance, used by for collections Arvados Workbench 2 47 New New 1 16071 47 379 6	18041 18041 Review Peter Amstutz 47 0 16071 1 36 -c-a 5
19612 19612 Sarah Zaranek Sarah Zaranek 326 Workbench2 77 Workbench2 Frozen project UI follow-up improvements New New 1 19612 36 326 379 6
18997 18997 Tom Clegg Tom Clegg 3 Docker 68 Docker ability to migrate arvbox to arvados-server boot dev mode New New 1 18997 36 3 379 6
19387 19387 Support picking workflows uploaded as collections with type: workflow. Arvados Workbench 2 47 New New 1 19387 47 379 2
19386 19386 Peter Amstutz Peter Amstutz 47 CWL 79 CWL --create-workflow creates or updates collection with metadata New New 1 19386 36 47 379 2
19382 19382 SDKs 54 SDKs Cannot stream stdin to arv-put with --update-collection New New 1 19382 36 379 1
19838 19838 Update help text on docs for CLI tools New New 1 19838 36 379 1
19620 19620 Keep 53 Keep Remove old keepstore S3 driver on arvados 2.6.0 New New 1 19620 36 379 1
16385 16385 Docker 68 Docker add prebuilt container images for Arvados releases New New 1 16385 36 379 2
19307 19307 Workbench2 78 Workbench2 Directly shared collection with write permission cannot be modified Arvados Workbench 2 47 New New 1 19307 47 379 1	19397 19397 Review Peter Amstutz 47 0 19307 1 36 -c-a 5
19615 19615 Workbench2 77 Workbench2 Evaluate ideas for integrating help into wb2 New New 1 19615 36 379 6
19154 19154 Workbench2 78 Workbench2 Sharing dialog improvements followup Arvados Workbench 2 47 New New 1 19154 47 379 6	19160 19160 Review Peter Amstutz 47 0 19154 1 36 -c-a 5