Project

General

Profile

Download (5.84 KB)

Story #12037 » container.json

Lucas Di Pentima, 07/28/2017 02:11 PM

 
{
"auth_uuid": "1zj7s-gj3su-rgf6fnx5optadj6",
"command": [
"arvados-cwl-runner",
"--local",
"--api=containers",
"--no-log-timestamps",
"--debug",
"--disable-reuse",
"--on-error=continue",
"/var/lib/cwl/workflow.json#main",
"/var/lib/cwl/cwl.input.json"
],
"container_image": "23ba2134ae25b03ed7f643c7762d7b0c+419",
"created_at": "2017-07-28T14:04:32.950079000Z",
"cwd": "/var/spool/cwl",
"environment": {},
"etag": "3f0g5lnh6xfm6gpz99dra1awl",
"exit_code": null,
"finished_at": null,
"href": "/containers/1zj7s-dz642-bvvopmp5qs9rdjx",
"kind": "arvados#container",
"locked_by_uuid": "1zj7s-gj3su-cbfvk29rfdmgpge",
"log": null,
"modified_at": "2017-07-28T14:04:35.783924000Z",
"modified_by_client_uuid": "1zj7s-ozdt8-juvj385oy3thhc6",
"modified_by_user_uuid": "1zj7s-tpzed-000000000000000",
"mounts": {
"/var/lib/cwl/cwl.input.json": {
"content": {
"inp1": [
"one",
"two"
],
"inp2": [
"three",
"four"
]
},
"kind": "json"
},
"/var/lib/cwl/workflow.json": {
"content": {
"$graph": [
{
"arguments": [
"-n",
"foo"
],
"baseCommand": "echo",
"class": "CommandLineTool",
"id": "#echo",
"inputs": [
{
"id": "#echo/echo_in1",
"inputBinding": {},
"type": "string"
},
{
"id": "#echo/echo_in2",
"inputBinding": {},
"type": "string"
}
],
"outputs": [
{
"id": "#echo/echo_out",
"outputBinding": {
"glob": "step1_out",
"loadContents": true,
"outputEval": "$(self[0].contents)"
},
"type": "string"
}
],
"stdout": "step1_out"
},
{
"class": "Workflow",
"id": "#main",
"inputs": [
{
"id": "#main/inp1",
"type": {
"items": "string",
"type": "array"
}
},
{
"id": "#main/inp2",
"type": {
"items": "string",
"type": "array"
}
}
],
"outputs": [
{
"id": "#main/out",
"outputSource": "#main/step1/echo_out",
"type": {
"items": "string",
"type": "array"
}
}
],
"requirements": [
{
"class": "ScatterFeatureRequirement"
}
],
"steps": [
{
"id": "#main/step1",
"in": [
{
"id": "#main/step1/echo_in1",
"source": "#main/inp1"
},
{
"id": "#main/step1/echo_in2",
"source": "#main/inp2"
}
],
"out": [
"#main/step1/echo_out"
],
"run": "#echo",
"scatter": [
"#main/step1/echo_in1",
"#main/step1/echo_in2"
],
"scatterMethod": "dotproduct"
}
]
}
],
"cwlVersion": "v1.0"
},
"kind": "json"
},
"/var/spool/cwl": {
"kind": "collection",
"writable": true
},
"stdout": {
"kind": "file",
"path": "/var/spool/cwl/cwl.output.json"
}
},
"output": null,
"output_path": "/var/spool/cwl",
"owner_uuid": "1zj7s-tpzed-000000000000000",
"priority": 1,
"progress": null,
"runtime_constraints": {
"API": true,
"keep_cache_ram": 268435456,
"ram": 1073741824,
"vcpus": 1
},
"scheduling_parameters": {},
"started_at": null,
"state": "Locked",
"uuid": "1zj7s-dz642-bvvopmp5qs9rdjx"
}
(1-1/5)