Project

General

Profile

Actions
Copy link

Story #4783

closed

[CWL] Implement CWL prototype workflow runner

Added by Peter Amstutz about 10 years ago. Updated almost 10 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Peter Amstutz
Category:
-
Target version:
2015-03-11 sprint
Start date:
03/10/2015
Due date:
% Done:

100%

Estimated time:
(Total: 0.00 h)
Story points:
2.0

Description

Implement a standalone pipeline runner for the common workflow language reference implementation. It will support all features agreed upon by the CWL community and be able to run all valid CWL pipelines which fit on a single node. This includes running tools in docker, passing output from one stage as input to the next stage, and implicit iteration/fanout.

Not including Arvados integration.

Subtasks 1 (0 open — 1 closed)

Task #5431: Implement workflow runner and add testsResolvedPeter Amstutz03/10/2015

Actions

Related issues 2 (0 open — 2 closed)

Related to Arvados - Story #4685: [Crunch] CWL prototype workflow runner in ArvadosResolvedPeter Amstutz04/07/2015

Actions
Related to Arvados - Story #4687: [Crunch] Support Brad Chapman to port bcbio tools and workflows to CWLResolvedPeter Amstutz01/12/2015

Actions
Actions
Copy link

Also available in: Atom PDF