Story #7296
closed
Document Sprite Annotation Server
Added by Sarah Guthrie over 9 years ago.
Updated almost 7 years ago.
Assigned To:
Sarah Guthrie
Estimated time:
(Total: 0.50 h)
Description
Should include CAVA, ExAC, and ClinVar annotations and be able to respond to basic API requests
Files
- Subject changed from Document common annotation queries to Document Sprite Annotation Server
- Description updated (diff)
- Parent task deleted (
#7269)
- Story points set to 1.0
- Tracker changed from Task to Story
- Target version changed from 2015-10-02 sprint to 2015-10-23 Lightning sprint
- Project changed from 39 to Lightning
- Target version changed from 2015-10-23 Lightning sprint to 2015-11-13 Lightning sprint
- Target version changed from 2015-11-13 Lightning sprint to 2015-10-23 Lightning sprint
- Status changed from New to In Progress
- Description updated (diff)
Take out requirement on ExAC - highly complicated and vastly less useful than ClinVar and CAVA.
Altered the sprite/annotations.txt file, so focus there for review. I uploaded the latex pdf document required, but it has some problems with text wrapping. If you want a dynamic visualization that looks a lot better, follow this recipe using the curoverse/lightning github repository:
git pull origin master
sudo apt-get install python-pip
sudo pip install Sphinx
sudo pip install sphinx_rtd_theme
cd docs
make html
Open lighting/docs/_build/html/index.html in your browser. Enjoy!
- Target version changed from 2015-10-23 Lightning sprint to 2015-11-13 Lightning sprint
- Status changed from In Progress to Closed
Closing this out for now.
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Updated by Sarah Guthrie 
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