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Idea #8773

closed

[GATK Queue] Support a mechanism to redirect stderr for children

Added by Brett Smith about 10 years ago. Updated about 7 years ago.

Status:
Closed
Priority:
Normal
Assigned To:
-
Category:
-
Target version:
-
Start date:
Due date:
Story points:
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 #1

Updated by Bryan Cosca almost 10 years ago

In wx7k5-d1hrv-8rh74st484xax0g, I'm using ["--logging_level", "ERROR"] to supress WARN logs. In wx7k5-8i9sb-mz4pjsuxgvqsef5, the warning did not propagate to the java command.

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 #2

Updated by Bryan Cosca almost 10 years ago

Peter found the quick fix by updating the scala script that queue uses to include the logging parameter.

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 #3

Updated by Brett Smith almost 10 years ago

  • Assigned To set to Brett Smith
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 #4

Updated by Brett Smith almost 10 years ago

  • Assigned To deleted (Brett Smith)

Lower priority because we solved the immediate need by editing the specific Scala script.

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 #5

Updated by Tom Clegg about 9 years ago

  • Status changed from New to Closed
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 #6

Updated by Tom Morris about 7 years ago

  • Target version deleted (Arvados Future Sprints)
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